publications

2023年

  1. Heqiang Lou, Lili Song, Xiaolong Li, Hailing Zi, Weijie Chen, Yadi Gao, Shan Zheng, Zhangjun Fei, Xuepeng Sun, Jiasheng Wu. The Torreya grandis genome illuminates the origin and evolution of gymnosperm-specific sciadonic acid biosynthesis. Nature Communications, 2023, 14: 1315. 【PDF】
  2. Lou HQ, Zheng S, Chen WC, Yu WW, Jiang HF, Farag MA, Xiao JB, Wu JS, Song LL. Transcriptome-referenced association study provides insights into the regulation of oil and fatty acid biosynthesis in Torreya grandis kernel. Journal of Advanced Research, 2023.【PDF】
  3. Yan JW, Zeng H, Chen WJ, Zheng S, Luo JL, Jiang HF, Yang BR, Farag MA, Lou HQ, Song LL, Wu JS. Effects of tree age on flavonoids and antioxidant activity in Torreya grandis nuts via integrated metabolome and transcriptome analyses. Food Frontiers, 2023, 4(1):358-367.【PDF】
  4. Yan JW, Kong N, Liu QM, Wang MM, Lv K, Zeng H, Chen WJ, Luo JL, Lou HQ, Song LL, Wu, J. Ti3C2Tx MXene nanosheets enhance the tolerance of Torreya grandis to Pb stress. Journal of Hazardous Materials, 2023, 445, 130647.【PDF】
  5. Lili Song#, Xuecheng Meng#, Hanbing Song, Lingling Gao, Yadi Gao, Wenchao Chen, Weiwei Huan, Jinwei Suo, Weiwu Yu, Yuanyuan Hu, Baoru Yang, Zuying Zhang*, Jiasheng Wu*. A comprehensive metabolomics analysis of Torreya grandis nuts with the effective de-astringent treatment during the postharvest ripening stage. Food Chemistry, 2023, 398: 133859. 【PDF】
  6. Zuying Zhang, Wenchao Chen, Liu Tao, Xixing Wei, Lingling Gao, Yadi Gao, Jinwei Suo, Weiwu Yu, Yuanyuan Hu, Baoru Yang, Huifeng Jiang, Mohamed A. Farag, Jiasheng Wu, Lili Song. Ethylene treatment promotes umami taste-active amino acids accumulation of Torreya grandis nuts post-harvest by comparative chemical and transcript analyses. Food Chemistry, 2023, 408: 135214.【PDF】
  7. Jinwei Suo, Zhenmin Ma, Bing Zhao, Shuang Ma, Zuying Zhang, Yuanyuan Hu, Baoru Yang, Weiwu Yu, Jiasheng Wu, Lili Song. Metabolomics reveal changes in flavor quality and bioactive components in post-ripening Torreya grandis nuts and the underlying mechanism. Food Chemistry, 2023, 406: 134987.【PDF】
  8. Zuying Zhang, Liu Tao, Lingling Gao, Yadi Gao, Jinwei Suo, Weiyu Yu, Yuanyuan Hu, Chunyan Wei, Mohamed A. Farag, Jiasheng Wu1, Lili Song. Transcription factors TgbHLH95 and TgbZIP44 co-target terpene biosynthesis gene TgGPPS in Torreya grandis nuts. Plant Physiology, 2023, https://doi.org/10.1093/plphys/kiad385.【PDF】
  9. Zuying Zhang, Zhenmin Ma, Lili Song, Mohamed A. Farag. Maximizing crustaceans (shrimp, crab, and lobster) by-products value for optimum valorization practices: A comparative review of their active ingredients, extraction, bioprocesses and applications. Journal of Advanced Research, 2023. (Major revision)【PDF】
  10. Wu X*, Zhang L*, Wang X, et al., Ma Y#, Zhang C#, Wang J# (2023) Evolutionary history of two evergreen Rhododendron species as revealed by chromosome-level genome assembly, Front. Plant Sci., doi: 10.3389/fpls.2023.1123707.【PDF】
  11. Rui Zhang, Jianhong Lin, Jinbin Zheng, Isabelle Chuine, Nicolas Delpierre, Ivan Janssens, Koen Kramer, Heikki Hänninen, Jiasheng Wu. Discovering ecophysiological causes of different spring phenology responses of trees to climatic warming, Agricultural and Forest Meteorology, 2023, 340, 109593.（2021C02066–11）【PDF】
  12. Junjun Bao, Yuanyuan Hu, Mohamed A Farag, Weiwei Huan, Jiasheng Wu, Dapeng Yang, Lili Song. Carbon dots, cellulose nanofiber, and essential oil nanoemulsion from Torreya grandis aril added to fish scale gelatin film for tomato preservation，International Journal of Biological Macromolecules, 2023, 245, 125482【PDF】
  13. Zhihui Liu, Jiawen Yan, Tongtong Wang , Weijie Chen , Jinwei Suo, Jingwei Yan, Jiasheng Wu. TgLCYB1 regulated by TgWRKY22 enhances the tolerance of Torreya grandis to waterlogging stress, International Journal of Biological Macromolecules, 2023, 253, 126702【PDF】
  14. Qi Wang, Chenliang Yu, Congcong Kong,· Hao Zeng, Weiwu Yu, Jiasheng Wu. Genomics analysis of three phosphorus-dissolving bacteria isolated from Torreya grandis soil, INTERNATIONAL MICROBIOLOGY, 2023, https://doi.org/10.1007/s10123-023-00393-7. (2021C02066-11)【PDF】
  15. 郑刘辉,侯宇,张新凤,喻卫武,曾燕如,戴文圣. 香榧种子生长发育过程中假种皮挥发油的变化. 林业科学, 2022, 58, 11 (2016C02052-12)【PDF】
  16. 沈家怡，吴翠萍，姚佳，吴家胜，张瑞，胡渊渊*. 香榧假种皮开裂过程中组织结构、细胞壁代谢的变化. 林业科学，2023，59（2）：86-95.【PDF】

 

2022年

  1. Yan JW, Chen WJ, Zeng H, Cheng H, Suo JW, Yu CL, Yang BR, Lou HQ, Song LL, Wu JS. Unraveling the malate biosynthesis during development of Torreya grandis nuts. Current Research in Food Science, 2022, 5: 2309–2315.【PDF】
  2. Chenliang Yu, Hao Zeng, Qi Wang, Wenchao Chen, Weijie Chen, Weiwu Yu, Heqiang Lou, and Jiasheng Wu. Multi-omics analysis reveals the molecular responses of Torreya grandis shoots to nanoplastic pollutant, Journal of Hazardous Materials, 2022, doi.org/10.1016/j.jhazmat.2022.129181.【PDF】
  3. Yuanyuan Hu, Jinwei Suo, Guoxiang Jiang, Jiayi Shen, Hao Cheng, Heqiang Lou, Weiwu Yu, Jiasheng Wu, Lili Song. The effect of ethylene on squalene and β-sitosterol biosynthesis and its key gene network analysis in Torreya grandis nuts during post-ripening process. Food Chemistry, 2022, https://doi.org/10.1016/j.foodchem.2021.130819.【PDF】
  4. Yuanyuan Hu, Zuying Zhang, Bin Hua, Liu Tao, Wenchao Chen, Yadi Gao, Jinwei Suo, Weiwu Yu, Jiasheng Wu, Lili Song. The interaction of temperature and relative humidity affects the main aromatic components in postharvest Torreya grandis nuts. Food Chemistry, 2022, https://doi.org/10.1016/j.foodchem.2022.130836.【PDF】
  5. Jinwei Suo, Yadi Gao, Haizhen Zhang, Guifang Wang, Hao Cheng, Yuanyuan Hu, Heqiang Lou, Weiwu Yu, Wensheng Dai, Lili Song, Jiasheng Wu, New insights into the accumulation of vitamin B3 in Torreya grandis nuts via ethylene induced key gene expression. Food Chemistry 2022, https://doi.org/10.1016/j.foodchem.2021.131050.【PDF】
  6. Lili Song, Xuecheng Meng, Lei Yang, Zhenmin Ma, Minying Zhou, Chenliang Yu, Zuying Zhang, Weiwu Yu, Jiasheng Wu, Heqiang Lou. Identification of key genes and enzymes contributing to nutrition conversion of Torreya grandis nuts during post-ripening process. Food Chemistry, 2022, 384, 132454.【PDF】
  7. Heqiang Lou, Yi Yang, Shan Zheng, Zhenmin Ma, Wenchao Chen, Chenliang Yu, Lili Song, Jiasheng Wu. Identification of key genes contributing to amino acid biosynthesis in Torreya grandis using transcriptome and metabolome analysis. Food Chemistry, 2022, 379, 132078.【PDF】
  8. Feicui Zhang, Zhenmin Ma, Yan Qiao, Zhanqi Wang, Wenchao Chen, Shan Zheng, Chenliang Yu, Lili Song, Heqiang Lou, Jiasheng Wu. Transcriptome sequencing and metabolomics analyses provide insights into the flavonoid biosynthesis in Torreya grandis kernels. Food Chemistry 2022, 374, 131558.【PDF】
  9. Wang, F., Zhang, R., Lin, J., Zheng, J., Hänninen, H. and Wu, J. High autumn temperatures increase the depth of bud dormancy in the subtropical Torreya grandis and Carya illinoinensis and delay leaf senescence in the deciduous Carya. Trees. 2022.【PDF】
  10. Zhang, R., Lin, J., Wang, F., Delpierre, N., Kramer, K., Hänninen, H. and Wu, J. Spring phenology in subtropical trees: Developing process-based models on an experimental basis. Agricultural and Forest Meteorology, 2022, 314, 108802.【PDF】
  11. Hussain, Q., Zheng, M., Ashraf, M.F., Khan, R., Yasir, M., Farooq, S., Zhang, R. and Wu, J. Genome-wide identification, characterization and expression analysis of the ABA receptor PYL gene family in response to ABA, photoperiod, and chilling in vegetative buds of Liriodendron chinense. Scientia Horticulturae, 2022, 303, 111200.【PDF】
  12. Chenliang Yu, Qi Wang, Shouke Zhang, Hao Zeng, Weijie Chen, Wenchao Chen，Heqiang Lou, Weiwu Yu and Jiasheng Wu. Effects of Strigolactone on Torreya grandis Gene Expression and Soil Microbial Community Structure Under Simulated Nitrogen Deposition, Frontiers in Plant Science. 2022, 13:908129.doi: 10.3389/fpls.2022.908129.【PDF】
  13. Zhang L, Zheng J, Hänninen H, Bhalerao R P, Wu J, Zhang R. Differences between four sympatric subtropical tree species in the interactive effects of three environmental cues on leaf-out phenology. Agricultural and Forest Meteorology, 2022, 327: 109227. 【PDF】
  14. Zhou ZH, Yrjälä K, Chen JH, Yu CL, Shi WH, Qin H, Yu WW, Dai WS, Hu YY*, Wu JS*. Organic amendments combined with biochar for improving soil and plant quality in a Torreya grandis plantation. Journal of Soils and Sediments, 2022, 22: 1080-1094.【PDF】
  15. Yan J, Yang L, Liu Y, Zhao Y, Han T, Miao X, Zhang A.Setaria italicacalcineurin B-like protein 5 (SiCBL5) positively confers salt tolerance by regulating Na+homeostasis. The Crop Journal, 2022, 10(1): 234-242【PDF】
  16. Li K*, Wu Z*, et al., Zhang C#, Sun Q# (2022) R-loopAtlas: an integrated R-loop resource from 254 plant species sustained by a deep learning-based tool, Molecular Plant, doi: 10.1016/j.molp.2022.12.012.【PDF】
  17. Chen W, Wan H, Liu F, Du H, Zhang C#, Fan W#, Zhu A# (2022) Rapid evolution of T2/S-RNase genes in Fragaria linked to multiple transitions from self-incompatibility to self-compatibility, Plant Diversity, doi: 10.1016/j.pld.2022.04.003.【PDF】
  18. Zhou Y, Zhang C#, Zhang L, Ye Q, Liu N, Wang M, Long G, Fan W, Long M#, Wing R# (2022) Gene Fusion as an Important Mechanism to Generate New Genes in the Genus Oryza, Genome Biology, 23:130.【PDF】
  19. Zhou Y, Zhang J, et al., Yang Y, Zhang C, Yang Y# (2022) Cold Tolerance of ScCBL6 Is Associated with Tonoplast Transporters and Photosynthesis in Arabidopsis, Current Issues in Molecular Biology, doi: 10.3390/cimb44110378.【PDF】
  20. 王桂芳，索金伟，王哲，成豪，胡渊渊，张可伟，吴家胜. 香榧种实膨大过程中蔗糖代谢及其基因表达，浙江农林大学学报，2022，39:1-12.【PDF】

 

2021年

  1. Rui Zhang; Jianhong Lin; Fucheng Wang; Sitian Shen; Xaiobin Wang; Ying Rao; Jiasheng Wu; Heikki Hänninen. The chilling requirement of subtropical trees is fulfilled by high temperatures: A generalized hypothesis for tree endodormancy release and a method for testing it. Agricultural and Forest Meteorology. 2021, doi: 10.1016/j.agrformet.2020.108296.【PDF】
  2. Song LL, Wen SS, Ye Q, Lou HQ, Gao YD, Bajpai VK, Carpena M, Prieto MA, Simal-Gandara J, Xiao JB, Meng XH, Wu JS. Advances on delta 5-unsaturated-polymethyleneinterrupted fatty acids: Resources, biosynthesis, and benefits. Critical Reviews in Food Science and Nutrition, 2021, https://doi.org/10.1080/10408398.2021.1953960.【PDF】
  3. Yunduan Li#, Yuanyuan Zhang#, Xincheng Liu, Yuwei Xiao, Zuying Zhang, Yanna Shi, Wenbing Kong, Xiaofang Yang, Guihua Jiang*, Bo Zhang*, Kunsong Chen*. Cultivation conditions change aroma volatiles of strawberry fruit. Horticulturae, 2021, 7, 81.【PDF】
  4. Wenchao Chen, Jiaqi Zhang, Shan Zheng, Zhanqi Wang, Chuanmei Xu, Qixiang Zhang, Jiasheng Wu, Heqiang Lou. Metabolite profiling and transcriptome analyses reveal novel regulatory mechanisms of melatonin biosynthesis in hickory. Horticulture Research, 2021, 8:196.【PDF】
  5. Yadi Gao#, Yuanyuan Hu#, Jiayi Shen, Jinwei Suo, Zuying Zhang, Lili Song*, Jiasheng Wu*. Acceleration of aril cracking by ethylene in Torreya grandis during nut maturation. Frontiers in Plant Science, 2021, 12:761139.【PDF】
  6. Jewaria PK, Hänninen Heikki, Li Xiaojuan, Bhalerao RP, Zhang Rui. A hundred years after: endodormancy and the chilling requirement in subtropical trees. New Phytologist. 2021, 231:565-570.【PDF】
  7. Yan J, Liu Y, Yang L, He H, Huang Y, Fang L, Scheller H, Jiang M, Zhang A. Cell wall β-1,4-galactan regulated by BPC1/BPC2-GALS1 module aggravates salt sensitivity in Arabidopsis thaliana. Molecular Plant.2021, 14 (3): 411-425【PDF】
  8. Liu L, Xiang Y,Yan J, Di P, Li J, Sun X, Han G, Ni L, Jiang M, Yuan J, Zhang A. BRASSINOSTEROID‐SIGNALING KINASE 1 phosphorylating CALCIUM/CALMODULIN‐DEPENDENT PROTEIN KINASE functions in drought tolerance in maize. New Phytologist, 2021, 231(2): 695-712【PDF】
  9. Hu Y*, Wu X, Jin G, et al., Chuanzhu Fan#, Zhang C# (2021) Rapid Genome Evolution and Adaptation of Thlaspi arvense Mediated by Recurrent RNA-Based and Tandem Gene Duplications, Front. Plant Sci., doi: 10.3389/fpls.2021.772655.【PDF】
  10. Jin G*, Ma P*, Wu X, Gu L, Long M, Zhang C#, Li D# (2021) New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos, Molecular Biology and Evolution, 38(12):5752-5768. doi: 10.1093/ molbev/msab288.【PDF】
  11. Liu N, Zhang L, Zhaou Y, Tu M, Wu Z, Gui D, Ma Y, Wang J#, Zhang C# (2021) The Rhododendron Plant Genome Database (RPGD): a comprehensive online omics database for Rhododendron, BMC Genomics, 22:376. DOI: 10.1186/s12864-021-07704-0.【PDF】
  12. Wang X*, Gao Y*, Wu X* et al., Zhang C#, Zhang L#, Xia Y# (2021) High-quality evergreen azalea genome reveals tandem duplication-facilitated low-altitude adaptability and floral scent evolution, Plant Biotechnol J, doi: 10.1111/pbi.13680.【PDF】
  13. Zhou Y*, Lu L, et al., Wang J#, Zhang C# (2021) Analysis of MYB genes in four plant species and the detection of those associated with drought resistance, Botany, doi: 10.1139/cjb-2020-0227.【PDF】
  14. 王哲，吴诗涵，索金伟，吴家胜. 香榧僵果调查与解剖学观察, 浙江农业科学，2021，62（10）:1950-1952. 【PDF】

 

2020年

  1. Rui Zhang, Fucheng Wang, Jinbin Zheng, Jianhong Lin, Heikki Hänninen, Jiasheng Wu. Chilling accumulation and photoperiod regulate rest break and bud burst in five subtropical tree species. Forest Ecology & Management, 2021, doi:10.1016/j.foreco.2020.118813【PDF】
  2. Mingzhu Ding, Heqiang Lou, Wenchao Chen, Ying Zhou, Zihao Zhang, Minghui Xiao, Zhanqi Wang, Yi Yang, Lei Yang, Feicui Zhang, Jiasheng Wu, Lili Song. Comparative transcriptome analysis of the genes involved in lipid biosynthesis pathway and regulation of oil body formation in Torreya grandis kernels. Industrial Crops & Products 2020, 145, 112051.【PDF】
  3. Xianghe Meng, Dan Xiao, Qin Ye, Xiaohua Nie, Jiasheng Wu, Lili Song. Positional distribution of Δ5-olefinic acids in triacylglycerols from Torreya grandis seed oil: Isolation and purification of sciadonic acid. Industrial Crops & Products2020, 143, 111917.【PDF】
  4. Zuying Zhang, Hangbiao Jin, Jinwei Suo, Weiyu Yu, Minyin Zhou, Wensheng Dai, Lili Song, Yuanyuan Hu, Jiasheng Wu. Effect of Temperature and Humidity on Oil Quality of Harvested Torreya grandis cv. Merrillii Nuts during the After-Ripening Stage. Frontiers in Plant Science, 11:573681, doi: 10.3389/fpls.2020.573681.【PDF】
  5. Quaid Hussain, Muhammad Asim, Rui Zhang, Rayyan Khan, Saqib Farooq, Jiasheng Wu. Transcription Factors Interact with ABA through Gene Expression and Signaling Pathways to Mitigate Drought and Salinity Stress. 2021,11, 1159. https://doi.org/10.3390/biom11081159.【PDF】
  6. Rui Zhang, Jianhong Lin, Fucheng Wang, Heikki Hänninen, Jiasheng wu. Effects of climatic warming on spring phenology in subtropical trees: process-based modelling with experiments designed for model development. 2020, doi:10.22541/au.161210609.90934754/v1.【PDF】
  7. Zuying Zhang#, Yanna Shi#, Yuchen Ma, Xiaofang Yang, Xueren Yin, Yuanyuan Zhang, Yuwei Xiao, Wenli Liu, Yunduan Li, Shaojia Li, Xiaofen Liu, Donald Grierson, Andrew C. Allan, Guihua Jiang*, Kunsong Chen*. The strawberry transcription factor FaRAV1 positively regulates anthocyanin accumulation by activation of FaMYB10 and anthocyanin pathway genes, Plant Biotechnology Journal, 2020, 18: 2267-2279.【PDF】
  8. Huang R, Zhang Y, Zhang QX, Huang JQ, Hänninen H, Huang YJ, Hu YY*. Photosynthetic mechanisms of metaxenia responsible for enlargement of Carya cathayensis fruits at late growth stages. Frontiers in plant science, 2020, 11, 84.【PDF】
  9. Jinwei Suo, Heng Zhang, Qi Zhao, Nan Zhang, Yongxue Zhang, Ying Li, Baohua Song, Juanjuan Yu, Jianguo Cao, Tai Wang, Ji Luo, Lihai Guo, Jun Ma, Xumin Zhang, Yimin She, Lianwei Peng, Weimin Ma, Siyi Guo, Yuchen Miao, Sixue Chen, Zhi Qin, Shaojun Dai. Na2CO3-responsive Photosynthetic and ROS Scavenging Mechanisms in Chloroplasts of Alkaligrass Revealed by Phosphoproteomics. Genomics Proteomics Bioinformatics, 2020, 18,271-288.【PDF】
  10. Yan J, Fang L, Yang L, He H, Huang Y, Liu Y, Zhang A. Abscisic acid positively regulates L‐Arabinose metabolism to inhibit seed germination through ABI4‐mediated transcriptional promotions ofMUR4inArabidopsis thaliana. New Phytologist. 2020, 225 (2): 823-834【PDF】
  11. Yang H, Li P, Jin G, Gui D, Liu L#, Zhang C# (2020) Temporal regulation of alternative splicing events in rice memory under drought stress, Plant Diversity, doi: 10.1016/j.pld.2020.11.004.【PDF】
  12. Fang C, Gan X, Zhang C, He S# (2020) The new chimeric chiron genes evolved essential roles in zebrafish embryonic development by regulating NAD+ levels, Science China Life Sciences, doi: 10.1007/s11427-020-1851-0.【PDF】
  13. 冷容、胡彦婷、周艳丽、金桂花、李玲、石勇、杨红、桂大萍、薛润光、章成君. 人参种胚不同后熟发育阶段比较转录组学分析[J]. 分子植物育种, 2020, v.18(17):112-123.【PDF】
  14. 高雅迪，胡渊渊，吴家胜. 氮沉降对香榧林地土壤理化性状及植株性状的影响, 浙江农业科学，2020，61 (10): 2006-2008，2012．【PDF】
  15. 孟祥河, 杨奇波, 肖丹, 夏朝盛, 樊律廷, 宋丽丽, 吴家胜. 香榧籽油金松酸的分离及其1，3－甘油二酯的制备研究. 中国粮油学报, 2020, 35(7): 72-78.【PDF】
  16. 杨肖芳, 张祖瑛, 苗立祥, 张豫超, 沈岚, 秦巧平*, 蒋桂华*. ‘越心’草莓组培突变体着色差异的分子机理初探, 园艺学报, 2020, 47(10): 1999-2008.【PDF】

 

2019年

  1. Li, Quan; Song, Xinzhang; Yrjälä, Kim; Lv, Jianhua; Li, Yongfu; Wu, Jiasheng; Qin, Hua. Biochar mitigates the effect of nitrogen deposition on soil bacterial community composition and enzyme activities in a Torreya grandis orchard. Forest Ecology & Management, 2020, 457, 117717 doi:10.1016/j.foreco.2019.117717.【PDF】
  2. Junbo Zhang, Quan Li, Jiasheng Wu, Xinzhang Song. Effects of nitrogen deposition and biochar amendment on soil respiration in a Torreya grandis orchard. Geoderma, 2019, DOI: 10.1016/j.geoderma.2019.113918【PDF】
  3. Bingwen Chai, Jianhua Lv, Quan Li, Jiasheng Wu, Xinzhang Song. Interaction of Biochar Amendment and Nitrogen Deposition on Soil Microbial Biomass Carbon and Enzyme Activity in a Torreya grandis Orchard. Pol. J. Environ. Stud. 2019, 28(5), 3605-3614.【PDF】
  4. Jianhong Lin, Rui Zhang, Yuanyuan Hu, Yang Song, Heikki Hänninen, Jiasheng Wu. Interactive effects of drought and shading on Torreya grandis seedlings: physiological and growth responses. Trees, 2019, 33(3), 951–961.【PDF】
  5. Zhou Minying, Song Lili, Ye Shan, Zeng Wei, Hnnien Heikki, Yu Weiwu, Suo Jinwei, Hu Yuanyuan, Wu Jiasheng. New sights into lipid metabolism regulation by low temperature in harvested Torreya grandis nuts. Journal of the Science of Food & Agriculture, 2019, 99(9):4226-4234.【PDF】
  6. Heqiang Lou, Mingzhu Ding, Jiasheng Wu, Feicui Zhang, Wenchao Chen, Yi Yang, Jinwei Suo, Weiwu Yu, Chuanmei Xu, Lili Song, Full-Length Transcriptome Analysis of the Genes Involved in Tocopherol Biosynthesis in Torreya grandis, Journal of Agricultural and Food Chemistry, 2019, 67(7): 1877-1888.【PDF】
  7. Zhang Rui, Zhao Yuxin, Lin Jianhong, Hu Yuanyuan, Hanninen Heikki, Wu Jiasheng. Biochar application alleviates unbalanced nutrient uptake caused by N deposition in Torreya grandis trees and seedlings. Forest Ecology and Management, 2019, 432:319-326.【PDF】
  8. Jinwei Suo, Ke Tong, Jiasheng Wu, Mingzhu Ding, Wenchao Chen, Yi Yang, Heqiang Lou, Yuanyuan Hu, Weiwu Yu, Lili Song, Comparative transcriptome analysis reveals key genes in the regulation of squalene and β-sitosterol biosynthesis in Torreya grandis, Industrial Crops & Products, 2019, 131: 182-193.【PDF】
  9. Yuxing Feng, Yuanyuan Hu, Jiasheng Wu, Junhui Chen, Kim Yrjälä, Weiwu Yu. Change in microbial communities, soil enzyme and metabolic activity in a Torreya grandis plantation in response to root rot disease. Forest Ecology and Management 2019, 432:932-941.【PDF】
  10. Changtao Li, Jinwei Suo, Lingling Xuan, Mingzhu Ding, Hui Zhang, Lili Song, Yeqing Ying. Bamboo shoot-lignification delay by melatonin during low temperature storage. Postharvest Biology and Technology, 2019, 156: 110933.【PDF】
  11. Yan J, Huang Y, He H, Han T, Di P, Sechet J, Fang L, Liang Y, Scheller H, Mortimer J, Ni L, Jiang M, Hou X, Zhang A. Xyloglucan endotransglucosylase-hydrolase30 negatively affects salt tolerance inArabidopsis. Journal of Experimental Botany. 2019, 70 (19): 5495-5506【PDF】
  12. Shi Y*, Su Z*, Yang H* et al., Xue R#, Zhang C# (2019) Alternative splicing coupled to nonsense-mediated mRNA decay contributes to the high-altitude adaptation of maca (Lepidium meyenii), Gene, 694:7-18.DOI: 10.1016/j.gene.2018.12.082【PDF】
  13. Shi Y, Yan X, Yin H et al., Zhang C#, Ma X# (2019) Divergence and hybridization in the desert plant Reaumuria soongarica, Journal of Systematics and Evolution, doi: 10.1111/jse.12490.【PDF】
  14. Zhou Y, Zhang C# (2019) Evolutionary patterns of chimeric retrogenes in Oryza species, Scientific Reports, 9:17733. doi: 10.1038/s41598-019-54085-2【PDF】
  15. Jin G, Zhou Y, Yang H, Hu Y, Shi Y, Li L, Abu N. Siddique, Liu C, Zhu A, Zhang C#, and Li D# (2019) Transposable element recruitment and de novo formation lead to the birth of orphan genes in the rice genome, Journal of Systematics and Evolution, doi: 10.1111/jse.12548.【PDF】
  16. Zhang L, Ren Y, Yang T et al., Zhang C, Zhang Y, Ouyang Y, Wing R#, Liu S#, Long M# (2019) Rapid evolution of protein diversity by de novo origination in Oryza, Nature Ecology & Evolution, 3:679-690. DOI: 10.1038/s41559-019-0822-5.【PDF】
  17. Li P*, Yang H*, Wang L, Liu H, Huo H, Zhang C, et al., Lin Y, Liu L# (2019) Physiological and transcriptome analyses reveal short-term responses and formation of memory under drought stress in rice, Frontiers in Genetics, doi: 10.3389/fgene.2019.00055.【PDF】
  18. 钱可伟，宋丽丽，赵荻，周敏樱，胡君艳，吴家胜. 榧粉饼粕膨化食品加工工艺. 食品工业，2019，40（8）：136-142.【PDF】
  19. 单燕飞，王为宇，项伟霞，宋丽丽，周敏樱，陈嘉伟，索金伟，喻卫武，吴家胜，胡渊渊.堆沤温度对后熟过程中榧籽主要营养物质变化的影响.林业科学，2019，55（7）：46-56.【PDF】
  20. 张韵，刘涛，张涛，谢乐添，黄坚钦，王正加，胡渊渊.薄壳山核桃果实假果皮的光合特性.林业科学，2019，55（10）：10-18.【PDF】
  21. 黄仁，张韵，张启香，王正加，夏国华，黄坚钦，胡渊渊.异源授粉山核桃果皮光合能力差异的转录组分析.林业科学，2019，55（1）：128-137.【PDF】
  22. 徐沁怡，王标，赵建文，吴建峰，曹亦润，杨先有，夏国华，王正加，黄坚钦，胡渊渊，2种花粉授粉山核桃果皮光合特性的差异比较，林业科学，53(1):38-46.【PDF】

 

2018年

  1. Jiasheng Wu, Jiandiao Huang, Yiwei Hong, Haizhen Zhang, Mingzhu Ding, Heqiang Lou, Yuanyuan Hu, Weiwu Yu, Lili Song. De novo transcriptome sequencing of Torreya grandis reveals gene regulation in sciadonic acid biosynthesis pathway, Industrial Crops & Products, 2018, 120: 47-60.【PDF】
  2. Hu Y, Zhang Y, Yu W, Hänninen H, Song L, Du X, Zhang R, Wu J. Novel Insights into the Influence of Seed Sarcotesta Photosynthesis on Accumulation of Seed Dry Matter and Oil Content in Torreya grandis cv. "Merrillii", Frontiers in Plant Science, 2018, 8:2179.【PDF】
  3. Yuanyuan Zhang#, Xueren Yin#, Yuwei Xiao, Zuying Zhang, Shaojia Li, Xiaofen Liu, Bo Zhang, Xiaofang Yang, Donald Grierson, Guihua Jiang*, Harry J. Klee*, Kunsong Chen*. An ethylene response factor-MYB transcription complex regulates furaneol biosynthesis by activating quinone oxidoreductase expression in strawberry, Plant Physiology, 2018, 178: 189-201.【PDF】
  4. Yan J, Aznar A, Chalvin C, Birdseye D, Baidoo E, Eudes A, Shih P, Loque D, Zhang A, Scheller H. Increased drought tolerance in plants engineered for low lignin and low xylan content. Biotechnology for Biofuels, 2018, 11 (1): 195【PDF】
  5. Chen J, Ni P, Li X, Han J, Jackovlic I, Zhang C and Zhao S# (2018) Population size may shape the accumulation of functional mutations following domestication, BMC Evolutionary Biology, 18(4). DOI: 10.1186/s12862-018-1120-6【PDF】
  6. Stein JC, Yu Y, Copetti D, Zwickl DJ, Zhang L, Zhang C, Chougule K et al., Long M, Ware D, Wing RA# (2018) Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza, Nature Genetics, 50:285-296.【PDF】
  7. Li Y, Fang C, Fu Y et al., Zhang C, Li C# (2018) A survey of transcriptome complexity in Sus scrofa using single-molecule long-read sequencing, DNA Research, 25(4) 421-437.DOI: 10.1093/dnares/dsy014【PDF】
  8. 赵荻，楼君，庄志诚，刘圆，喻卫武，胡渊渊，宋丽丽，吴家胜. 叔丁基对苯二酚（TBHQ）对香榧烘烤和货架品质以及抗氧化能力的影响. 林业科学，2018,54（10）：39-45.【PDF】
  9. 肖宇玮, 张圆圆, 张祖瑛, 李绍佳, 殷学仁, 陈昆松*. 草莓AP2/ERF转录因子AD-cDNA文库的构建, 果树学报, 2018, 35(7): 777-784.【PDF】

 

2017年

  1. Rui Zhang, Yongling Zhang, Lili Song, Xinzhang Song, Heikki Hänninen, Jiasheng Wu. Biochar enhances nut quality of Torreya grandis and soil fertility under simulated nitrogen deposition, Forest Ecology and Management, 2017, 391:321-329.【PDF】
  2. Jinwei Suo, Qi Zhao, Lisa David, Sixue Chen, Shaojun Dai. Salinity response in chloroplasts: insights from gene characterization. International Journal of Molecular Sciences, 2017, 18(5): 1011.【PDF】
  3. Zhu Y, Chen L, Zhang C, Hao P, Jing X, Li X, (2017) Global transcriptome analysis reveals extensive gene remodeling, alternative splicing and differential transcription profiles in non-seed vascular plant Selaginella moellendorffii, BMC genomics, 18(1):1042.DOI: 10.1186/s12864-016-3266-1【PDF】
  4. Zhang L*, Xu P*, Cai Y*, Ma L*, et al., Zhang C, Gao Q, Wang J (2017) The draft genome assembly of Rhododendron delavayi Franch. var. delavayi, GigaScience, 6:1-11. DOI: 10.1093/gigascience/gix076【PDF】
  5. 刘志敏，赵宏波，黄有军，梅丽，黄坚钦，胡渊渊，吴家胜.‘香榧’雌配子体发育和原胚形成的组织学观察. 果树学报, 2017, 34(02) 231-237.【PDF】

2016年

  1. Jie Shen, Lili Song, Karin Müller, Yuanyuan Hu, Yang Song, Weiwu Yu, Hailong Wang, Jiasheng Wu, Magnesium Alleviates Adverse Effects of Lead on Growth, Photosynthesis, and Ultrastructural Alterations of Torreya grandis Seedlings, Frontiers in Plant Science, 2016, 7: 1819.【PDF】
  2. Xu QY, Wu JF, Cao YR, Yang XY, Wang ZJ, Huang JQ, Xia GH, Zhang QX, Hu YY*, Photosynthetic characteristics of leaves and fruits of Hickory (Carya cathyensis Sarg.) and Pecan (Carya illinoensis K.Koch) during fruit development stages，Trees，2016，30(5): 1-12.【PDF】
  3. Hu YY,Yu WW, Song LL, Du XH, Ma XH, Liu Y, Wu JS, Ying YQ, Effects of light on production of camptothexin and expression of key enzyme genes in seedlings of Camptotheca acuminate Decne，Acta Physiol Plant，2016 , 38 (3) :1-9.【PDF】
  4. Hu YY, Yu WW, Liu T, Shafi M, Song LL, Du XH, Huang XH, Yue YL, Wu JS，Effects of paclobutrazol on cultivars of Chinese bayberry (Myrica rubra) under salinity stress，Photosynthetica，2016 , 1-12.【PDF】
  5. Qi Zhao, Jinwei Suo, Sixue Chen, Yudan Jin, Xiaolin Ma, Zepeng Yin, Yuhong Zhang, Tai Wang, Ji Luo, Wenhai Jin, Xia Zhang, Zhiqiang Zhou, Shaojun Dai. Na2CO3-responsive Mechanisms in Halophyte Puccinellia tenuiflora Roots Revealed by Physiological and Proteomic Analyses. Scientific Reports, 2016, 6: 32717.【PDF】
  6. Zhu Y, Yan J, Liu W, Liu L, Sheng Y, Sun Y, Li Y, Scheller H, Jiang M, Hou X, Ni L, Zhang A. Phosphorylation of a NAC transcription factor by a calcium/calmodulin-dependent protein kinase regulates abscisic acid-induced antioxidant defense in maize. Plant Physiology, 2016, 171 (3): 1651-1664【PDF】
  7. Fang L, Ishikawa T, Rennie E, Murawska G, Lao J,Yan J,Tsai A, Baidoo E, Xu J, Keaslin J, Demura T, Kawai Y, Scheller H, Mortimer J. Loss of inositol phosphorylceramide sphingolipid mannosylation induces plant immune responses and reduces cellulose content in Arabidopsis. The Plant Cell, 2016, 28 (12): 2991-3004【PDF】
  8. Ouyang Y#, Li G, Mi J, Xu C, Du H, Zhang C, Xie W, Li X, Xiao J, Song H, Zhang Q (2016) Origination and Establishment of a Trigenic Reproductive Isolation System in Rice, Molecular Plant, 9:1542-1545.DOI: 10.1016/j.molp.2016.07.008【PDF】
  9. 杜丽思，章成君，张靖，彭晟，杨静，刘林，李成云，杜云龙#（2016）两种生态型玛咖叶片的丛生芽诱导，云南农业科技，10.3969/j.issn.1000-0488.2016.02.001【PDF】
  10. 宋洋，廖亮，刘涛，蒋燕锋，喻卫武，胡渊渊，吴家胜. 不同遮荫水平下香榧苗期光合作用及氮分配的响应机制. 林业科学, 2016, 52(5): 55-63.【PDF】

 

2015年

  1. Hui Tang, YuanYuan Hu, WeiWu Yu, LiLi Song, JiaSheng Wu. Growth, photosynthetic and physiological responses of Torreya grandis seedlings to varied light environments, Trees, 2015, 29, 1011-1022.【PDF】
  2. Jinwei Suo, Qi Zhao, Zhengxiu Zhang, Sixue Chen, Jian'guo Cao, Guanjun Liu, Xing Wei, Tai Wang, Chuanping Yang, Shaojun Dai. Cytological and proteomic analyses of Osmunda cinnamomea germinating spores reveal characteristics of fern spore germination and rhizoid tip-growth. Molecular & Cellular Proteomics, 2015, 14(9): 2510-2534.【PDF】
  3. Qi Zhao, Jing Gao, Jinwei Suo, Sixue Chen, Tai Wang, Shaojun Dai. Cytological and proteomic analyses of horsetail (Equisetum arvense L.) spore germination. Frontiers in Plant Science, 2015, 6: 441. 【PDF】
  4. Jinwei Suo, Sixue Chen, Qi Zhao, Lei Shi, Shaojun Dai. Fern spore germination in response to environmental factors. Frontiers in Biology, 2015, 10(4): 358-376.【PDF】
  5. Yan J, Guan L, Sun Y, Zhu Y, Liu L, Lu R, Jiang M, Tan M, Zhang A. Calcium and ZmCCaMK are involved in brassinosteroid-induced antioxidant defense in maize leaves.Plant and Cell Physiology, 2015, 56 (5): 883-896【PDF】
  6. Zhang C#*, Yang H, Yang H (2015) Evolutionary Character of Alternative Splicing in Plants, Bioinformatics and Biology Insights, 9(S1):1-6.DOI: 10.4137/BBI.S33716.【PDF】
  7. 黄增冠，喻卫武，罗宏海，李昱飞，戴文圣，胡渊渊，吴家胜. 香榧不同叶龄叶片光合能力与氮含量及其分配关系的比较, 林业科学, 2015, 51(2): 44-51.【PDF】
  8. 陈佳妮，廖亮，黄增冠，戴文圣，喻卫武，胡渊渊，吴家胜. 香榧与榧树叶片光合特性及其光保护机制的比较, 林业科学, 2015, 51(10): 134-141.【PDF】

 

2014年

  1. Chaohua Shen, Yuanyuan Hu, Xuhua Du, Tingting Li, Hui Tang, Jiasheng Wu. Salicylic acid induces physiological and biochemical changes in Torreya grandis cv. Merrillii seedlings under drought stress. Trees, 2014, 28(4):961-970.【PDF】
  2. Tingting Li, Yuanyuan Hu, Xuhua Du, Hui Tang, Chaohua Shen, Jiasheng Wu. Salicylic Acid Alleviates the Adverse Effects of Salt Stress in Torreya grandis cv. Merrillii Seedlings by Activating Photosynthesis and Enhancing Antioxidant Systems. PLoS ONE, 2014, 9(10):e109492.【PDF】
  3. Hu YY, Zhang YL, Yi XP, Zhan DX, Luo HH, Chow WS, Zhang WF, The relative contribution of non-foliar organs of cotton to yield andrelated physiological characteristics under water defcit，Journal of Integrative Agriculture，2014，13(5):975-989.【PDF】
  4. Zhang C, Gschwend RA, Ouyang Y, Long M (2014) , Evolution of gene structural complexity: An alternative-splicing based model accounts for intron-containing retrogenes, Plant Physiology, doi: 10.1104/pp.113.231696.【PDF】
  5. 索金伟, 戴绍军. 蛋白质可逆磷酸化对花粉管生长的调控作用. 遗传, 2014, 36(08): 766-778.【PDF】
  6. 唐辉，李婷婷，沈朝华，胡渊渊，吴家胜. 氮素形态对香榧苗期光合作用、主要元素吸收及氮代谢的影响, 林业科学, 2014, 50(10): 158-163.【PDF】

 

2013年

  1. Hu YY, Oguchi R, Yamori W, Caemmerer S von, Chow WS, Zhang WF, Cotton bracts are adapted to a microenvironment of concentrated CO2 produced by rapid fruit respiration，Annal of botany，2013,112:31-40.【PDF】
  2. Hu YY, Fan DY, Losciale P, Chow WS, Zhang WF, Whole-tissue determination of the rate coefficients of photoinactivation and repair of photosystem II in cotton leaf discs based on flash-induced P700 redox kinetics，Photosynthesis Research，2013, 117 (1) :517-528.【PDF】
  3. Zhang C*, Wang J*, Long M, Fan C (2013) gKaKs: The pipeline for genome level Ka/Ks calculation, Bioinformatics, doi: 10.1093/bioinformatics/btt009.【PDF】
  4. Yan W, Liu H, Zhou X, Li Q, Zhang J, Lu L, Liu T, Liu H, Zhang C, Zhang Z, Shen G, Yao W, Chen H, Yu S, Xie W, Xing Y (2013) Natural variation in Ghd7.1 plays an important role in grain yield and adaptation in rice, Cell Research, doi: 10.1038/cr.2013.43.【PDF】
  5. Zhang C*, Wang J*, Marowsky NC, Long M, Rod AW, Fan C (2013) High Occurrence of Functional New Chimeric Genes in Survey of Rice Chromosome 3 Short Arm Genome Sequences, Genome Biology and Evolution, doi: 10.1093/gbe/evt071.【PDF】

 

2012年

  1. Hu YY, Zhang YL, Luo HH, Li W, Oguchi R, Fan DY. Important photosynthetic contribution from the non-foliar green organs in cotton at the late growth stage，Planta，2012，235：325-336.【PDF】
  2. Hu Y, Liu D, Zhong X, Zhang C, Zhang Q, Zhou DX (2012) CHD3 protein recognizes and regulates methylated histone H3 lysines 4 and 27 over a subset of targets in the rice genome, Proc Natl Acad Sci USA, 109(15): 5773-5778.【PDF】
  3. Zhou G, Chen Y, Yao W, Zhang C, Xie W, Hua J, Xing Y, Xiao J, and Zhang Q (2012) Genetic composition of yield heterosis in an elite rice hybrid, Proc Natl Acad Sci USA, 109(39):15847-15852.【PDF】

 

2011年

  1. Zhang C, Wang J, Xie W, Zhou , Long M , Zhang Q (2011) Dynamic programming procedure for searching optimal models to estimate substitution rates based on the maximum-likelihood method, Proc Natl Acad Sci USA, 2011, 108(19):7860-7865.【PDF】
  2. Du H, Ouyang Y, Zhang C, Zhang Q (2011) Complex evolution of S5, a major reproductive barrier regulator, in the cultivated rice Oryza sativa and its wild relatives, New Phytologist, 2011, 191:275-287.【PDF】

 

2010年

  1. Xia J, Hu X, Shi F, Niu X and Zhang C (2010) Support vector machine method on predicting resistance gene against Xanthomonas oryzae pv. oryzae in rice. Expert Systems with Applications 37:5946-5950.【PDF】

 

2009年

  1. Xie W, Chen Y, Zhou G, Wang L, Zhang C, Zhang J, Xiao J, Zhu T, Zhang Q (2009) Single feature polymorphisms between two rice cultivars detected using a median polish method. Theor Appl Genet 119:151-164.【PDF】

     

2008年

  1. Nayidu NK, Wang L, Xie W, Zhang C, Fan C, Lian X, Zhang Q, Xiong L (2008) Comprehensive sequence and expression profile analysis of PEX11 gene family in rice. Gene 412:59-70.【PDF】
  2. Nuruzzaman M, Gupta M, Zhang C, Wang L, Xie W, Xiong L, Zhang Q and Lian X (2008) Sequence and expression analysis of the thioredoxin protein gene family in rice. MGG 280:139-151.【PDF】
  3. Gupta M, Qiu X, Wang L, Xie W, Zhang C, Xiong L, Lian X, Zhang Q (2008) KT/HAK/KUP potassium transporters gene family and their whole-life cycle expression profile in rice (Oryza sativa). MGG 280:437-52.【PDF】